Structure of PDB 1rxm Chain A Binding Site BS01
Receptor Information
>1rxm Chain A (length=245) Species:
2234
(Archaeoglobus fulgidus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVD
IPKDSFEVYNIDEEKTIGVDMDRIFDISKSISTKDLVELIVEDESTLKVK
FGSVEYKVALIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKISD
QVIFRSDKEGFRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKE
FCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAPRIESE
Ligand information
>1rxm Chain B (length=12) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
KTTQSTLDSFFK
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1rxm
Structural Basis for FEN-1 Substrate Specificity and PCNA-Mediated Activation in DNA Replication and Repair
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
N43 V44 M46 P123 L125 Y219 P220 A239 P240 R241 I242 E243 S244 E245
Binding residue
(residue number reindexed from 1)
N43 V44 M46 P123 L125 Y219 P220 A239 P240 R241 I242 E243 S244 E245
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0030337
DNA polymerase processivity factor activity
Biological Process
GO:0006260
DNA replication
GO:0006272
leading strand elongation
GO:0006275
regulation of DNA replication
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1rxm
,
PDBe:1rxm
,
PDBj:1rxm
PDBsum
1rxm
PubMed
14718165
UniProt
O29912
|PCNA_ARCFU DNA polymerase sliding clamp (Gene Name=pcn)
[
Back to BioLiP
]