Structure of PDB 1r8k Chain A Binding Site BS01
Receptor Information
>1r8k Chain A (length=327) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SAQRVVITPGEPAGSGPDLVVQLAQRAWPIELVVCADGALLTERAAMLGL
PLSLLPYSPDVPAAPQPAGTLTLLPVSLRAPAISGQLTVENGPYVVETLA
RACDGCLNGEFAALITGPVHKGVINDAGISFTGHTEFFEERSQAKKVVMM
LATEELRVALATTHLPLRAIADAITPALLHEVIAILHHDLRTKFGIAEPR
ILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQP
KYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALE
LAGRGKADVGSFITALNLAIKMIVNTQ
Ligand information
Ligand ID
CO
InChI
InChI=1S/Co/q+2
InChIKey
XLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Co+2]
CACTVS 3.341
[Co++]
Formula
Co
Name
COBALT (II) ION
ChEMBL
DrugBank
DB14205
ZINC
PDB chain
1r8k Chain A Residue 902 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1r8k
Crystal Structure of Escherichia coli PdxA, an Enzyme Involved in the Pyridoxal Phosphate Biosynthesis Pathway
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
H166 H266
Binding residue
(residue number reindexed from 1)
H164 H264
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.1.1.262
: 4-hydroxythreonine-4-phosphate dehydrogenase.
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0008270
zinc ion binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0050570
4-hydroxythreonine-4-phosphate dehydrogenase activity
GO:0050897
cobalt ion binding
GO:0051287
NAD binding
Biological Process
GO:0008615
pyridoxine biosynthetic process
GO:0042823
pyridoxal phosphate biosynthetic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1r8k
,
PDBe:1r8k
,
PDBj:1r8k
PDBsum
1r8k
PubMed
UniProt
P58717
|PDXA_SALTY 4-hydroxythreonine-4-phosphate dehydrogenase (Gene Name=pdxA)
[
Back to BioLiP
]