Structure of PDB 1r8e Chain A Binding Site BS01
Receptor Information
>1r8e Chain A (length=275) Species:
1423
(Bacillus subtilis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIH
LDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFLSALE
QTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGIGPENVLNASY
SKLKKFIESADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISS
ITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYIADRQLTVVSDVY
ELIIPIHYSPKKQEEYRVEMKIRIA
Ligand information
>1r8e Chain B (length=23) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gaccctccccttaggggagggtc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1r8e
The structural mechanism for transcription activation by MerR family member multidrug transporter activation, N terminus.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
S7 I8 G9 R23 Y42 R43
Binding residue
(residue number reindexed from 1)
S5 I6 G7 R21 Y40 R41
Binding affinity
PDBbind-CN
: Kd=2.4nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1r8e
,
PDBe:1r8e
,
PDBj:1r8e
PDBsum
1r8e
PubMed
14985361
UniProt
P39075
|BMRR_BACSU Multidrug-efflux transporter 1 regulator (Gene Name=bmrR)
[
Back to BioLiP
]