Structure of PDB 1pq8 Chain A Binding Site BS01
Receptor Information
>1pq8 Chain A (length=224) Species:
5507
(Fusarium oxysporum) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSG
FQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNI
GYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATC
RAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNG
CARPNYSGVYASVGALRSFIDTYA
Ligand information
>1pq8 Chain C (length=3) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
GGR
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1pq8
Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
Resolution
1.0 Å
Binding residue
(original residue number in PDB)
H56 N96 D189 S190 C191 Q192 G193 S195 S211 W212
Binding residue
(residue number reindexed from 1)
H41 N81 D174 S175 C176 Q177 G178 S180 S196 W197
Enzymatic activity
Catalytic site (original residue number in PDB)
H56 D99 Q192 G193 D194 S195 G196
Catalytic site (residue number reindexed from 1)
H41 D84 Q177 G178 D179 S180 G181
Enzyme Commision number
3.4.21.4
: trypsin.
Gene Ontology
Molecular Function
GO:0004252
serine-type endopeptidase activity
GO:0008236
serine-type peptidase activity
Biological Process
GO:0006508
proteolysis
Cellular Component
GO:0005576
extracellular region
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1pq8
,
PDBe:1pq8
,
PDBj:1pq8
PDBsum
1pq8
PubMed
12937176
UniProt
P35049
|TRYP_FUSOX Trypsin
[
Back to BioLiP
]