Structure of PDB 1p99 Chain A Binding Site BS01
Receptor Information
>1p99 Chain A (length=255) Species:
158878
(Staphylococcus aureus subsp. aureus Mu50) [
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KVTIGVASNDTKAWEKVKELAKKDDIDVEIKHFSDYNLPNKALNDGDIDM
NAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVKDGAK
VVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAV
DAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINI
VAVNDKDLDNKTYAKIVELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAI
ETSLA
Ligand information
Ligand ID
GLY
InChI
InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)
InChIKey
DHMQDGOQFOQNFH-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C(C(=O)O)N
CACTVS 3.341
NCC(O)=O
ACDLabs 10.04
O=C(O)CN
Formula
C2 H5 N O2
Name
GLYCINE
ChEMBL
CHEMBL773
DrugBank
DB00145
ZINC
ZINC000004658552
PDB chain
1p99 Chain A Residue 300 [
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Receptor-Ligand Complex Structure
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PDB
1p99
The membrane-associated lipoprotein-9 GmpC from Staphylococcus aureus binds the dipeptide GlyMet via side chain interactions.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
A119 N208 G209 N238
Binding residue
(residue number reindexed from 1)
A80 N169 G170 N199
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:1p99
,
PDBe:1p99
,
PDBj:1p99
PDBsum
1p99
PubMed
15610013
UniProt
A0A0H3JTG5
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