Structure of PDB 1onw Chain A Binding Site BS01
Receptor Information
>1onw Chain A (length=376) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNC
TVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSV
VGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEK
DVAIIDRVIGVKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVF
HMGDSKKALQPIYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGT
IDITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSGVAGFETLLET
VQVLVKDYDFSISDALRPLTSSVAGFLNLTGKGEILPGNDADLLVMTPEL
RIEQVYARGKLMVKDGKACVKGTFET
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
1onw Chain A Residue 800 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1onw
High Resolution X-ray Structure of Isoaspartyl Dipeptidase from Escherichia coli
Resolution
1.65 Å
Binding residue
(original residue number in PDB)
H68 H70 K162 D285
Binding residue
(residue number reindexed from 1)
H68 H70 K162 D285
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
H68 H70 K162 H201 H230 D285
Catalytic site (residue number reindexed from 1)
H68 H70 K162 H201 H230 D285
Enzyme Commision number
3.4.19.-
Gene Ontology
Molecular Function
GO:0008237
metallopeptidase activity
GO:0008270
zinc ion binding
GO:0008798
beta-aspartyl-peptidase activity
GO:0016787
hydrolase activity
GO:0016810
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0042802
identical protein binding
GO:0046872
metal ion binding
Biological Process
GO:0006508
proteolysis
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1onw
,
PDBe:1onw
,
PDBj:1onw
PDBsum
1onw
PubMed
12718528
UniProt
P39377
|IADA_ECOLI Isoaspartyl dipeptidase (Gene Name=iadA)
[
Back to BioLiP
]