Structure of PDB 1mwm Chain A Binding Site BS01

Receptor Information
>1mwm Chain A (length=316) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MLVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTL
NGEQYSFDPISPDTNIAWQYSDVNVVAVHHALLTSGLPVSEVDIVCTLPL
TEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGY
EVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTS
AVKDALSLARTKGSSYLADDIIIHRKDNNYLKQRINDENKISIVTEAMNE
ALRKLEQRVLNTLNEFSGYTHVMVIGGGAELICDAVKKHTQIRDERFFKT
NNSQYDLVNGMYLIGN
Ligand information
Ligand IDADP
InChIInChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKeyXTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
FormulaC10 H15 N5 O10 P2
NameADENOSINE-5'-DIPHOSPHATE
ChEMBLCHEMBL14830
DrugBankDB16833
ZINCZINC000012360703
PDB chain1mwm Chain A Residue 500 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1mwm F-actin-like filaments formed by plasmid segregation protein ParM
Resolution2.0 Å
Binding residue
(original residue number in PDB)		G8 T10 N11 K13 G172 G173 D223 I227 G281 E284 Q308
Binding residue
(residue number reindexed from 1)		G8 T10 N11 K13 G168 G169 D219 I223 G277 E280 Q304
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0042802 identical protein binding
Biological Process
GO:0030541 plasmid partitioning

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1mwm, PDBe:1mwm, PDBj:1mwm
PDBsum1mwm
PubMed12486014
UniProtP11904|PARM_ECOLX Plasmid segregation protein ParM (Gene Name=parM)

[Back to BioLiP]