Structure of PDB 1m7j Chain A Binding Site BS01

Receptor Information
>1m7j Chain A (length=474) Species: 511 (Alcaligenes faecalis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PFDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSASSARRRIDVAG
KVVSPGFIDSHTHDDNYLLKHRDMTPKISQGVTTVVTGNCGISLAPLAHA
NPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVM
PDLRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEV
CRPLITHGGVYATHMRDEGEHIVQALEETFRIGRELDVPVVISHHKVMGK
LNFGRSKETLALIEAAMASQDVSLDAYPYVAGSTMLKQDRVLLAGRTLIT
WCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRIL
AFGPTMIGSDGLPHDERPHPRLWGTFPRVLGHYSRDLGLFPLETAVWKMT
GLTAAKFGLAERGQVQPGYYADLVVFDPATVADSATFEHPTERAAGIHSV
YVNGAAVWEDQSFTGQHAGRVLNR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain1m7j Chain A Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1m7j Crystal Structure of D-Aminoacylase from Alcaligenes faecalis DA1. A NOVEL SUBSET OF AMIDOHYDROLASES AND INSIGHTS INTO THE ENZYME MECHANISM.
Resolution1.5 Å
Binding residue
(original residue number in PDB)		C96 H220 H250
Binding residue
(residue number reindexed from 1)		C90 H214 H244
Annotation score1
Enzymatic activity
Enzyme Commision number 3.5.1.81: N-acyl-D-amino-acid deacylase.
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
GO:0046872 metal ion binding
GO:0047420 N-acyl-D-amino-acid deacylase activity

View graph for
Molecular Function
External links
PDB RCSB:1m7j, PDBe:1m7j, PDBj:1m7j
PDBsum1m7j
PubMed12454005
UniProtQ9AGH8

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