Structure of PDB 1m38 Chain A Binding Site BS01

Receptor Information

>1m38 Chain A (length=282) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TYTTRQIGAKNTLEYKVYIEKDGKPVSAFHDIPLYADKENNIFNMVVEIP
RWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW
EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGE
TDWKVIAIDINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPE
NQFAFSGEAKNKKYALDIIKETHDSWKQLIAGKSSDSKGIDLTNVTLPDT
PTYSKAASDAIPPASPKADAPIDKSIDKWFFI

Ligand information

Ligand ID

InChI

InChI=1S/Co/q+2

InChIKey

XLJKHNWPARRRJB-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Co+2]
CACTVS 3.341	[Co++]

Formula

Name

COBALT (II) ION

PDB chain

1m38 Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1m38 X-Ray Structure of Yeast Inorganic Pyrophosphatase
Resolution	1.8 Å
Binding residue (original residue number in PDB)	D115 D120 D152
Binding residue (residue number reindexed from 1)	D115 D120 D152
Annotation score	1

Enzymatic activity

Enzyme Commision number

3.6.1.1: inorganic diphosphatase.

Gene Ontology

	Molecular Function
GO:0000287	magnesium ion binding
GO:0004427	inorganic diphosphate phosphatase activity
GO:0005515	protein binding
GO:0016787	hydrolase activity
GO:0046872	metal ion binding

	Biological Process
GO:0006796	phosphate-containing compound metabolic process

	Cellular Component
GO:0005634	nucleus
GO:0005737	cytoplasm

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Molecular Function

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Cellular Component

External links

PDB	RCSB:1m38, PDBe:1m38, PDBj:1m38
PDBsum	1m38
PubMed
UniProt	P00817\|IPYR_YEAST Inorganic pyrophosphatase (Gene Name=IPP1)

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