Structure of PDB 1ls5 Chain A Binding Site BS01
Receptor Information
>1ls5 Chain A (length=328) Species:
5833
(Plasmodium falciparum) [
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SENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSI
GCSTKHLYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLPY
KFIEVTDADDLEPIYSGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKID
NALFTFYLPVHDKHVGYLTIGGIESDFYEGPLTYEKLNHDLYWQIDLDIH
FGKYVMQKANAVVDSGTSTITAPTSFLNKFFRDMNVIKVPFLPLYVTTCD
NDDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPALCMLYILPVDIDDNTFI
LGDPFMRKYFTVFDYEKESVGFAVAKNL
Ligand information
>1ls5 Chain C (length=6) Species:
285516
(Streptomyces argenteolus subsp. toyonakensis) [
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VVVLAL
Receptor-Ligand Complex Structure
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PDB
1ls5
Novel uncomplexed and complexed structures of plasmepsin II, an aspartic protease from Plasmodium falciparum.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
D34 G36 S76 Y77 G78 S79 I123 Y192 D214 G216 T217 S218 I294
Binding residue
(residue number reindexed from 1)
D34 G36 S76 Y77 G78 S79 I123 Y192 D214 G216 T217 S218 I294
Enzymatic activity
Catalytic site (original residue number in PDB)
D34 S37 N39 W41 Y77 D214 T217
Catalytic site (residue number reindexed from 1)
D34 S37 N39 W41 Y77 D214 T217
Enzyme Commision number
3.4.23.39
: plasmepsin II.
Gene Ontology
Molecular Function
GO:0004190
aspartic-type endopeptidase activity
Biological Process
GO:0006508
proteolysis
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Molecular Function
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Biological Process
External links
PDB
RCSB:1ls5
,
PDBe:1ls5
,
PDBj:1ls5
PDBsum
1ls5
PubMed
12614616
UniProt
Q8IM16
|PLM4_PLAF7 Plasmepsin IV (Gene Name=PMIV)
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