Structure of PDB 1lb2 Chain A Binding Site BS01
Receptor Information
>1lb2 Chain A (length=201) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQV
NPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMT
HPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGT
R
Ligand information
>1lb2 Chain K (length=20) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cttttttcctaaaatgtgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1lb2
Structural basis of transcription activation: the CAP-alpha CTD-DNA complex.
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
R169 Q170 R180 E181 R185 K188
Binding residue
(residue number reindexed from 1)
R161 Q162 R172 E173 R177 K180
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003680
minor groove of adenine-thymine-rich DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0005515
protein binding
GO:0008301
DNA binding, bending
GO:0030552
cAMP binding
GO:0042802
identical protein binding
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006351
DNA-templated transcription
GO:0006355
regulation of DNA-templated transcription
GO:0045013
carbon catabolite repression of transcription
GO:0045892
negative regulation of DNA-templated transcription
GO:0045893
positive regulation of DNA-templated transcription
Cellular Component
GO:0005829
cytosol
GO:0032993
protein-DNA complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1lb2
,
PDBe:1lb2
,
PDBj:1lb2
PDBsum
1lb2
PubMed
12202833
UniProt
P0ACJ8
|CRP_ECOLI DNA-binding transcriptional dual regulator CRP (Gene Name=crp)
[
Back to BioLiP
]