Structure of PDB 1k8d Chain A Binding Site BS01
Receptor Information
>1k8d Chain A (length=274) Species:
10090
(Mus musculus) [
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GQHSLQYFHTAVSRPGLGEPWFISVGYVDDTQFVRFDSDAENPRMEPRAR
WMEQEGPEYWERETQIAKGHEQSFRGSLRTAQSYYNQSKGGSHTLQWMYG
CDMGSDGRLLRGYLQFAYEGRDYIALNEDLKTWTAVDMAAQITRRKWEQA
GIAEKDQAYLEGTCMQSLRRYLELGKETLLRTDPPKAHVTHHPRSYGAVT
LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCHVNHEGLPEPLTLRW
Ligand information
>1k8d Chain P (length=9) Species:
10090
(Mus musculus) [
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ILMEHIHKL
Receptor-Ligand Complex Structure
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PDB
1k8d
Promiscuous antigen presentation by the nonclassical MHC Ib Qa-2 is enabled by a shallow, hydrophobic groove and self-stabilized peptide conformation.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
Y7 E63 A67 H70 T80 Y84 W97 Y99 F116 Y123 T143 K146 W147 I152 K155 D156 Y159 S167 Y171
Binding residue
(residue number reindexed from 1)
Y7 E63 A67 H70 T80 Y84 W97 Y99 F116 Y123 T143 K146 W147 I152 K155 D156 Y159 S167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:1k8d
,
PDBe:1k8d
,
PDBj:1k8d
PDBsum
1k8d
PubMed
11738047
UniProt
P14429
|HA17_MOUSE H-2 class I histocompatibility antigen, Q7 alpha chain (Gene Name=H2-Q7)
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