Structure of PDB 1jvb Chain A Binding Site BS01

Receptor Information
>1jvb Chain A (length=347) Species: 2287 (Saccharolobus solfataricus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFG
NLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGN
CYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAA
PLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATII
GVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNS
EKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQS
DFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain1jvb Chain A Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1jvb Crystal structure of the alcohol dehydrogenase from the hyperthermophilic archaeon Sulfolobus solfataricus at 1.85 A resolution.
Resolution1.85 Å
Binding residue
(original residue number in PDB)
E98 C101 C104 C112
Binding residue
(residue number reindexed from 1)
E98 C101 C104 C112
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) C38 H39 S40 H43 H68 E69 E98 C101 C104 C112 R116 C154 T158 R342
Catalytic site (residue number reindexed from 1) C38 H39 S40 H43 H68 E69 E98 C101 C104 C112 R116 C154 T158 R342
Enzyme Commision number 1.1.1.1: alcohol dehydrogenase.
Gene Ontology
Molecular Function
GO:0004022 alcohol dehydrogenase (NAD+) activity
GO:0008270 zinc ion binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:1jvb, PDBe:1jvb, PDBj:1jvb
PDBsum1jvb
PubMed12051852
UniProtP39462|ADH_SACS2 NAD-dependent alcohol dehydrogenase (Gene Name=adh)

[Back to BioLiP]