Structure of PDB 1jpg Chain A Binding Site BS01
Receptor Information
>1jpg Chain A (length=275) Species:
10090
(Mus musculus) [
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PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRWEP
Ligand information
>1jpg Chain C (length=9) [
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FQPQNGQFI
Receptor-Ligand Complex Structure
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PDB
1jpg
Zooming in on the hydrophobic ridge of H-2D(b): implications for the conformational variability of bound peptides.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
Y7 E9 S24 Y45 E63 K66 Q70 W73 V76 S77 N80 L81 Y84 Q97 Y123 T143 K146 W147 S150 H155 Y156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)
Y6 E8 S23 Y44 E62 K65 Q69 W72 V75 S76 N79 L80 Y83 Q96 Y122 T142 K145 W146 S149 H154 Y155 Y158 E162 W166 Y170
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:1jpg
,
PDBe:1jpg
,
PDBj:1jpg
PDBsum
1jpg
PubMed
11580250
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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