Structure of PDB 1jpf Chain A Binding Site BS01
Receptor Information
>1jpf Chain A (length=275) Species:
10090
(Mus musculus) [
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PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRWEP
Ligand information
>1jpf Chain C (length=11) [
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SGVENPGGYCL
Receptor-Ligand Complex Structure
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PDB
1jpf
Zooming in on the hydrophobic ridge of H-2D(b): implications for the conformational variability of bound peptides.
Resolution
2.18 Å
Binding residue
(original residue number in PDB)
Y7 E63 K66 Q70 W73 V76 S77 N80 Y84 Q97 T143 K146 W147 S150 A152 H155 Y156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)
Y6 E62 K65 Q69 W72 V75 S76 N79 Y83 Q96 T142 K145 W146 S149 A151 H154 Y155 Y158 E162 W166 Y170
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:1jpf
,
PDBe:1jpf
,
PDBj:1jpf
PDBsum
1jpf
PubMed
11580250
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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