Structure of PDB 1jhg Chain A Binding Site BS01
Receptor Information
>1jhg Chain A (length=101) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRI
IEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKS
D
Ligand information
Ligand ID
TRP
InChI
InChI=1S/C11H12N2O2/c12-9(11(14)15)5-7-6-13-10-4-2-1-3-8(7)10/h1-4,6,9,13H,5,12H2,(H,14,15)/t9-/m0/s1
InChIKey
QIVBCDIJIAJPQS-VIFPVBQESA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C(N)Cc2c1ccccc1nc2
OpenEye OEToolkits 1.5.0
c1ccc2c(c1)c(c[nH]2)C[C@@H](C(=O)O)N
OpenEye OEToolkits 1.5.0
c1ccc2c(c1)c(c[nH]2)CC(C(=O)O)N
CACTVS 3.341
N[CH](Cc1c[nH]c2ccccc12)C(O)=O
CACTVS 3.341
N[C@@H](Cc1c[nH]c2ccccc12)C(O)=O
Formula
C11 H12 N2 O2
Name
TRYPTOPHAN
ChEMBL
CHEMBL54976
DrugBank
DB00150
ZINC
ZINC000000083315
PDB chain
1jhg Chain A Residue 111 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1jhg
An atomic view of the L-tryptophan binding site of trp repressor.
Resolution
1.3 Å
Binding residue
(original residue number in PDB)
R54 R84 G85 S88
Binding residue
(residue number reindexed from 1)
R47 R77 G78 S81
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0045892
negative regulation of DNA-templated transcription
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1jhg
,
PDBe:1jhg
,
PDBj:1jhg
PDBsum
1jhg
PubMed
8946848
UniProt
P0A881
|TRPR_ECOLI Trp operon repressor (Gene Name=trpR)
[
Back to BioLiP
]