Structure of PDB 1jay Chain A Binding Site BS01
Receptor Information
>1jay Chain A (length=212) Species:
2234
(Archaeoglobus fulgidus) [
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MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD
ASITGMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPV
SRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWD
VPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLILNIMR
FNGMGELGIKFL
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
1jay Chain A Residue 213 [
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Receptor-Ligand Complex Structure
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PDB
1jay
Structures of F420H2:NADP+ oxidoreductase with and without its substrates bound.
Resolution
1.65 Å
Binding residue
(original residue number in PDB)
G7 T9 G10 N11 L12 S31 R32 K36 T71 I72 P73 H76 P96 L97 V98 H133 I135 A137
Binding residue
(residue number reindexed from 1)
G7 T9 G10 N11 L12 S31 R32 K36 T71 I72 P73 H76 P96 L97 V98 H133 I135 A137
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.5.1.40
: 8-hydroxy-5-deazaflavin:NADPH oxidoreductase.
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0008823
cupric reductase (NADH) activity
GO:0016491
oxidoreductase activity
GO:0016651
oxidoreductase activity, acting on NAD(P)H
GO:0050661
NADP binding
GO:0052851
ferric-chelate reductase (NADPH) activity
GO:0070967
coenzyme F420 binding
GO:0102261
8-hydroxy-5-deazaflavin:NADPH oxidoreductase activity
Biological Process
GO:0006740
NADPH regeneration
GO:0015677
copper ion import
Cellular Component
GO:0005886
plasma membrane
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1jay
,
PDBe:1jay
,
PDBj:1jay
PDBsum
1jay
PubMed
11726492
UniProt
O29370
|FNO_ARCFU F420-dependent NADP reductase (Gene Name=fno)
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