Structure of PDB 1j25 Chain A Binding Site BS01

Receptor Information
>1j25 Chain A (length=133) Species: 186497 (Pyrococcus furiosus DSM 3638) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GVKVVVDSRELRSEVVKRLKLLGVKLEVKTLDVGDYIISEDVAIERKSAN
DLIQSIIDGGLFDQVKRLKEAYSRPIMIVEGSLYGIRNVHPNAIRGAIAA
VTVDFGVPIIFSSTPEETAQYIFLIAKREQEER
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain1j25 Chain A Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1j25 X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Resolution1.78 Å
Binding residue
(original residue number in PDB)		D38 E48 R49
Binding residue
(residue number reindexed from 1)		D35 E45 R46
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004518 nuclease activity

View graph for
Molecular Function
External links
PDB RCSB:1j25, PDBe:1j25, PDBj:1j25
PDBsum1j25
PubMed12679022
UniProtQ8TZH8

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