Structure of PDB 1j0q Chain A Binding Site BS01
Receptor Information
>1j0q Chain A (length=82) Species:
9913
(Bos taurus) [
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AVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGG
DATENFEDHGHSTDARELSKTFIIGELHPDDR
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
1j0q Chain A Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
1j0q
The solution structure of the oxidized bovine microsomal cytochrome b5 mutant V61H
Resolution
N/A
Binding residue
(original residue number in PDB)
F35 H39 P40 G41 V45 L46 N57 F58 H61 H63 S64 A67 S71 F74
Binding residue
(residue number reindexed from 1)
F33 H37 P38 G39 V43 L44 N55 F56 H59 H61 S62 A65 S69 F72
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0020037
heme binding
View graph for
Molecular Function
External links
PDB
RCSB:1j0q
,
PDBe:1j0q
,
PDBj:1j0q
PDBsum
1j0q
PubMed
12893266
UniProt
P00171
|CYB5_BOVIN Cytochrome b5 (Gene Name=CYB5A)
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