Structure of PDB 1hzj Chain A Binding Site BS01
Receptor Information
>1hzj Chain A (length=345) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRR
VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKP
LDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTG
GCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDP
QGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGH
IAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARRE
GDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
1hzj Chain A Residue 400 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1hzj
Human UDP-galactose 4-epimerase. Accommodation of UDP-N-acetylglucosamine within the active site.
Resolution
1.5 Å
Binding residue
(original residue number in PDB)
G9 G12 Y13 I14 D33 N34 H36 N37 D66 I67 F88 A89 G90 K92 S130 S132 Y157 K161 Y185 P188
Binding residue
(residue number reindexed from 1)
G8 G11 Y12 I13 D32 N33 H35 N36 D65 I66 F87 A88 G89 K91 S129 S131 Y156 K160 Y184 P187
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
S132 A133 T134 Y157 K161
Catalytic site (residue number reindexed from 1)
S131 A132 T133 Y156 K160
Enzyme Commision number
5.1.3.2
: UDP-glucose 4-epimerase.
5.1.3.7
: UDP-N-acetylglucosamine 4-epimerase.
Gene Ontology
Molecular Function
GO:0003974
UDP-N-acetylglucosamine 4-epimerase activity
GO:0003978
UDP-glucose 4-epimerase activity
GO:0016853
isomerase activity
GO:0042802
identical protein binding
GO:0042803
protein homodimerization activity
Biological Process
GO:0006012
galactose metabolic process
GO:0019388
galactose catabolic process
GO:0033499
galactose catabolic process via UDP-galactose
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1hzj
,
PDBe:1hzj
,
PDBj:1hzj
PDBsum
1hzj
PubMed
11279032
UniProt
Q14376
|GALE_HUMAN UDP-glucose 4-epimerase (Gene Name=GALE)
[
Back to BioLiP
]