Structure of PDB 1h8p Chain A Binding Site BS01
Receptor Information
>1h8p Chain A (length=88) Species:
9913
(Bos taurus) [
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EECVFPFVYRNRKHFDCTVHGSLFPWCSLDADYVGRWKYCAQRDYAKCVF
PFIYGGKKYETCTKIGSMWMSWCSLSPNYDKDRAWKYC
Ligand information
Ligand ID
PC
InChI
InChI=1S/C5H14NO4P/c1-6(2,3)4-5-10-11(7,8)9/h4-5H2,1-3H3,(H-,7,8,9)/p+1
InChIKey
YHHSONZFOIEMCP-UHFFFAOYSA-O
SMILES
Software
SMILES
ACDLabs 10.04
O=P(O)(O)OCC[N+](C)(C)C
CACTVS 3.341
C[N+](C)(C)CCO[P](O)(O)=O
OpenEye OEToolkits 1.5.0
C[N+](C)(C)CCOP(=O)(O)O
Formula
C5 H15 N O4 P
Name
PHOSPHOCHOLINE
ChEMBL
CHEMBL1235161
DrugBank
DB03945
ZINC
ZINC000001532692
PDB chain
1h8p Chain A Residue 1110 [
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Receptor-Ligand Complex Structure
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PDB
1h8p
Sperm Coating Mechanism from the 1.8 A Crystal Structure of Pdc-109-Phosphorylcholine Complex
Resolution
1.82 Å
Binding residue
(original residue number in PDB)
G87 S88 M89 W93 Y100 W106 Y108
Binding residue
(residue number reindexed from 1)
G66 S67 M68 W72 Y79 W85 Y87
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0008201
heparin binding
Biological Process
GO:0007338
single fertilization
GO:0033700
phospholipid efflux
GO:0048240
sperm capacitation
GO:1902492
positive regulation of sperm capacitation
Cellular Component
GO:0005576
extracellular region
GO:0005615
extracellular space
GO:0009986
cell surface
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1h8p
,
PDBe:1h8p
,
PDBj:1h8p
PDBsum
1h8p
PubMed
11937055
UniProt
P02784
|SFP1_BOVIN Seminal plasma protein PDC-109
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