Structure of PDB 1g9r Chain A Binding Site BS01

Receptor Information
>1g9r Chain A (length=278) Species: 487 (Neisseria meningitidis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MDIVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAA
NLRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVL
YLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEY
YFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKGGV
CYANSRFNFMPTNYAFMASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHR
DCTAWGAERFTELAGSLTTVPEEWRGKL
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain1g9r Chain A Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1g9r Crystal structure of the retaining galactosyltransferase LgtC from Neisseria meningitidis in complex with donor and acceptor sugar analogs.
Resolution2.0 Å
Binding residue
(original residue number in PDB)		D103 D105 H244
Binding residue
(residue number reindexed from 1)		D103 D105 H240
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) H78 D103 D105 D130 D188 Q189 H244 K250
Catalytic site (residue number reindexed from 1) H78 D103 D105 D130 D188 Q189 H240 K246
Enzyme Commision number 2.4.1.-
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016757 glycosyltransferase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:1g9r, PDBe:1g9r, PDBj:1g9r
PDBsum1g9r
PubMed11175908
UniProtQ93EK7

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