Structure of PDB 1g9f Chain A Binding Site BS01

Receptor Information
>1g9f Chain A (length=241) Species: 3847 (Glycine max) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDTPKPSSLGRALY
STPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQT
HAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTS
WDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEW
VRIGFSAATGLDIPGESHDVLSWSFASNLPHLDLTSFVLHE
Ligand information
Ligand IDGAL
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-FPRJBGLDSA-N
SMILES
SoftwareSMILES
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O
OpenEye OEToolkits 1.7.2C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
OpenEye OEToolkits 1.7.2C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
FormulaC6 H12 O6
Namebeta-D-galactopyranose;
beta-D-galactose;
D-galactose;
galactose
ChEMBLCHEMBL300520
DrugBank
ZINCZINC000002597049
PDB chain1g9f Chain C Residue 5 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1g9f Weak protein-protein interactions in lectins: the crystal structure of a vegetative lectin from the legume Dolichos biflorus.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		D88 G106 F128 N130 G213 L214 D215 I216
Binding residue
(residue number reindexed from 1)		D85 G103 F125 N127 G210 L211 D212 I213
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:1g9f, PDBe:1g9f, PDBj:1g9f
PDBsum1g9f
PubMed11491289
UniProtP05046|LEC_SOYBN Lectin (Gene Name=LE1)

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