Structure of PDB 1g6h Chain A Binding Site BS01
Receptor Information
>1g6h Chain A (length=254) Species:
2190
(Methanocaldococcus jannaschii) [
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TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVI
TGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENL
LIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGE
LSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKG
ITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEI
YIGE
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
1g6h Chain A Residue 300 [
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Receptor-Ligand Complex Structure
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PDB
1g6h
Crystal structures of the MJ1267 ATP binding cassette reveal an induced-fit effect at the ATPase active site of an ABC transporter.
Resolution
1.6 Å
Binding residue
(original residue number in PDB)
F17 F20 N42 G43 G45 K46 S47 T48
Binding residue
(residue number reindexed from 1)
F14 F17 N39 G40 G42 K43 S44 T45
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
Biological Process
GO:0006865
amino acid transport
Cellular Component
GO:0005886
plasma membrane
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Molecular Function
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Cellular Component
External links
PDB
RCSB:1g6h
,
PDBe:1g6h
,
PDBj:1g6h
PDBsum
1g6h
PubMed
11470432
UniProt
Q58663
|LIVG_METJA Probable branched-chain amino acid transport ATP-binding protein LivG (Gene Name=livG)
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