Structure of PDB 1flo Chain A Binding Site BS01

Receptor Information
>1flo Chain A (length=405) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PQFDILCKTPPKVLVRQFVERFERPSGEKIALCAAELTYLCWMITHNGTA
IKRATFMSYNTIISNSLSFDIVNKSLQFKYKTQKATILEASLKKLIPAWE
FTIIPYYSDITDIVSSLQLQFESKGNSHSKKMLKALLSEGESIWEITEKI
LNSFEYTSRFTKTKTLYQFLFLATFINCGRFSDIKNVDPKSFKLVQNKYL
GVIIQCLVTETKTSVSRHIYFFSARGRIDPLVYLDEFLRNSEPVLKRVNR
TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLM
TSFLSMKGLTELTNVVGNWSDKTTYTHQITAIPDHYFALVSRYYAYDPIS
KEMIALKDETNPIEEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSY
INRRI
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1flo Crystal structure of a Flp recombinase-Holliday junction complex: assembly of an active oligomer by helix swapping.
Resolution2.65 Å
Binding residue
(original residue number in PDB)		P2 T62 S169 R170 T174 Y178 K223 N278 R281 S282
Binding residue
(residue number reindexed from 1)		P1 T61 S158 R159 T163 Y167 K212 N267 R270 S271
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003690 double-stranded DNA binding
GO:0003697 single-stranded DNA binding
GO:0008301 DNA binding, bending
GO:0009009 site-specific recombinase activity
Biological Process
GO:0006310 DNA recombination
GO:0015074 DNA integration
GO:0042150 plasmid recombination
Cellular Component
GO:0005575 cellular_component

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1flo, PDBe:1flo, PDBj:1flo
PDBsum1flo
PubMed11090626
UniProtP03870|FLP_YEAST Site-specific recombinase Flp (Gene Name=FLP1)

[Back to BioLiP]