Structure of PDB 1es1 Chain A Binding Site BS01
Receptor Information
>1es1 Chain A (length=82) Species:
9913
(Bos taurus) [
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AVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGG
DATENFEDHGHSTDARELSKTFIIGELHPDDR
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
1es1 Chain A Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
1es1
Crystal structure of recombinant trypsin-solubilized fragment of cytochrome b(5) and the structural comparison with Val61His mutant.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
L32 F35 H39 P40 G41 L46 F58 H61 H63 S64 A67 S71
Binding residue
(residue number reindexed from 1)
L30 F33 H37 P38 G39 L44 F56 H59 H61 S62 A65 S69
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0020037
heme binding
View graph for
Molecular Function
External links
PDB
RCSB:1es1
,
PDBe:1es1
,
PDBj:1es1
PDBsum
1es1
PubMed
10842340
UniProt
P00171
|CYB5_BOVIN Cytochrome b5 (Gene Name=CYB5A)
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