Structure of PDB 1eiy Chain A Binding Site BS01
Receptor Information
>1eiy Chain A (length=345) Species:
300852
(Thermus thermophilus HB8) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
LAAIQNARDLEELKALKARYLGKKGLLTQEMKGLSALPLEERRKRGQELN
AIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITL
MERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLT
GEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTPPFRIVVPGRVFRF
EQTDATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFGPDSKVRFQP
VYFPFVEPGAQFAVWWPEGGKWLELGGAGMVHPKVFQAVDAYRERLGLPP
AYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQFKGVL
Ligand information
>1eiy Chain C (length=76) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gccgagguagcucaguugguagagcaugcgacugaaaaucgcaguguccg
cgguucgauuccgcgccucggcacca
<<<<<<<..<<<<........>>>>.<<<<<.......>>>>>.....<<
<<<.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1eiy
The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe.
Resolution
3.3 Å
Binding residue
(original residue number in PDB)
M148 W149 E220 G316
Binding residue
(residue number reindexed from 1)
M143 W144 E215 G311
Enzymatic activity
Catalytic site (original residue number in PDB)
W149 H178 R204 Q218 V261 A314
Catalytic site (residue number reindexed from 1)
W144 H173 R199 Q213 V256 A309
Enzyme Commision number
6.1.1.20
: phenylalanine--tRNA ligase.
Gene Ontology
Molecular Function
GO:0000049
tRNA binding
GO:0000166
nucleotide binding
GO:0000287
magnesium ion binding
GO:0004812
aminoacyl-tRNA ligase activity
GO:0004826
phenylalanine-tRNA ligase activity
GO:0005524
ATP binding
GO:0046872
metal ion binding
Biological Process
GO:0006412
translation
GO:0006432
phenylalanyl-tRNA aminoacylation
GO:0043039
tRNA aminoacylation
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1eiy
,
PDBe:1eiy
,
PDBj:1eiy
PDBsum
1eiy
PubMed
9016717
UniProt
Q5SGX2
|SYFA_THET8 Phenylalanine--tRNA ligase alpha subunit (Gene Name=pheS)
[
Back to BioLiP
]