Structure of PDB 1cn3 Chain A Binding Site BS01

Receptor Information
>1cn3 Chain A (length=283) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MEVLDLVTGPDSVTEIEAFLNPRMGQPPTPESLTEGGQYYGWSRGINLAT
SDTEDSPGNNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSG
SLLDVHGFNKPTDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDART
KYKEEGVVTIKTITKKDMVNKDQVLNPISKAKLDKDGMYPVEIWHPDPAK
NENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCV
DIMGWRVTRNYDVHHWRGLPRYFKITLRKRWVK
Ligand information
>1cn3 Chain F (length=29) Species: 10637 (Mouse polyomavirus (strain Crawford small-plaque)) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
GGGGGGGGAASHQRVTPDWMLPLILGLYG
Receptor-Ligand Complex Structure
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PDB1cn3 Interaction of polyomavirus internal protein VP2 with the major capsid protein VP1 and implications for participation of VP2 in viral entry.
Resolution2.2 Å
Binding residue
(original residue number in PDB)		K126 F240 T258 L259 T260 G268
Binding residue
(residue number reindexed from 1)		K93 F207 T225 L226 T227 G235
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:1cn3, PDBe:1cn3, PDBj:1cn3
PDBsum1cn3
PubMed9628860
UniProtP49302|VP1_POVMP Capsid protein VP1

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