Structure of PDB 1ce6 Chain A Binding Site BS01
Receptor Information
>1ce6 Chain A (length=274) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT
LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCRVYHEGLPEPLTLRW
Ligand information
>1ce6 Chain C (length=9) Species:
11198
(Sendai virus (Z)) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
FAPGNYPAL
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1ce6
Crystal structures of two H-2Db/glycopeptide complexes suggest a molecular basis for CTL cross-reactivity.
Resolution
2.9 Å
Binding residue
(original residue number in PDB)
Y7 E63 K66 Q70 W73 S77 N80 L81 Y84 L95 Q97 T143 K146 W147 H155 Y156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 E63 K66 Q70 W73 S77 N80 L81 Y84 L95 Q97 T143 K146 W147 H155 Y156 Y159 E163 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:1ce6
,
PDBe:1ce6
,
PDBj:1ce6
PDBsum
1ce6
PubMed
10023771
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
[
Back to BioLiP
]
