Structure of PDB 1cdp Chain A Binding Site BS01
Receptor Information
>1cdp Chain A (length=108) Species:
7962
(Cyprinus carpio) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AFAGVLNDADIAAALEACKAADSFNHKAFFAKVGLTSKSADDVKKAFAII
DQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVD
EFTALVKA
Ligand information
Ligand ID
CD
InChI
InChI=1S/Cd/q+2
InChIKey
WLZRMCYVCSSEQC-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Cd++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Cd+2]
Formula
Cd
Name
CADMIUM ION
ChEMBL
DrugBank
ZINC
PDB chain
1cdp Chain A Residue 109 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1cdp
Restrained least squares refinement of native (calcium) and cadmium-substituted carp parvalbumin using X-ray crystallographic data at 1.6-A resolution.
Resolution
1.6 Å
Binding residue
(original residue number in PDB)
D90 D92 D94 K96 E101
Binding residue
(residue number reindexed from 1)
D90 D92 D94 K96 E101
Annotation score
3
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005509
calcium ion binding
GO:0046872
metal ion binding
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:1cdp
,
PDBe:1cdp
,
PDBj:1cdp
PDBsum
1cdp
PubMed
2777802
UniProt
P02618
|PRVB_CYPCA Parvalbumin beta
[
Back to BioLiP
]