Structure of PDB 1cch Chain A Binding Site BS01
Receptor Information
>1cch Chain A (length=82) Species:
316
(Stutzerimonas stutzeri) [
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QDGEALFKSKPCAACHSVDTKMVGPALKEVAAKNAGVEGAADTLALHIKN
GSQGVWGPIPMPPNPVTEEEAKILAEWVLSLK
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
1cch Chain A Residue 83 [
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Receptor-Ligand Complex Structure
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PDB
1cch
Investigation of the solution conformation of cytochrome c-551 from Pseudomonas stutzeri.
Resolution
N/A
Binding residue
(original residue number in PDB)
C12 C15 H16 L44 H47 I48 S52 Q53 V55 W56 G57 I59 M61 P62 N64
Binding residue
(residue number reindexed from 1)
C12 C15 H16 L44 H47 I48 S52 Q53 V55 W56 G57 I59 M61 P62 N64
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0009055
electron transfer activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Cellular Component
GO:0042597
periplasmic space
View graph for
Molecular Function
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Cellular Component
External links
PDB
RCSB:1cch
,
PDBe:1cch
,
PDBj:1cch
PDBsum
1cch
PubMed
1327105
UniProt
P00101
|CY551_STUST Cytochrome c-551 (Gene Name=nirM)
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