Structure of PDB 1c9i Chain A Binding Site BS01

Receptor Information
>1c9i Chain A (length=355) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVI
IDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAH
TMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQ
IINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFA
QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFF
PPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET
IFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMA
VRNNL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1c9i Peptide-in-groove interactions link target proteins to the beta-propeller of clathrin.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		P65 I66 S67 L82 K83 Q89 F91 K96
Binding residue
(residue number reindexed from 1)		P63 I64 S65 L80 K81 Q87 F89 K94
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0030130 clathrin coat of trans-Golgi network vesicle
GO:0030132 clathrin coat of coated pit

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1c9i, PDBe:1c9i, PDBj:1c9i
PDBsum1c9i
PubMed10655490
UniProtP11442|CLH1_RAT Clathrin heavy chain 1 (Gene Name=Cltc)

[Back to BioLiP]