Structure of PDB 1bys Chain A Binding Site BS01

Receptor Information
>1bys Chain A (length=152) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EPSVQVGYSPEGSARVLVLSAIDSAKTSIRMMAYSFTAPDIMKALVAAKK
RGVDVKIVIDERGNTGRASIAAMNYIANSGIPLRTDSNFPIQHDKVIIVD
NVTVETGSFNFTKAAETKNSENAVVIWNMPKLAESFLEHWQDRWNQGRDY
RS
Ligand information
Ligand IDWO4
InChIInChI=1S/4O.W/q;;2*-1;
InChIKeyPBYZMCDFOULPGH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[O-][W](=O)(=O)[O-]
ACDLabs 10.04
CACTVS 3.341
[O-][W]([O-])(=O)=O
FormulaO4 W
NameTUNGSTATE(VI)ION
ChEMBL
DrugBank
ZINC
PDB chain1bys Chain A Residue 156 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1bys Crystal structure of a phospholipase D family member.
Resolution2.0 Å
Binding residue
(original residue number in PDB)
H94 K96
Binding residue
(residue number reindexed from 1)
H93 K95
Annotation score1
Enzymatic activity
Enzyme Commision number 3.1.4.4: phospholipase D.
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004519 endonuclease activity
GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters
Biological Process
GO:0006793 phosphorus metabolic process
GO:0008654 phospholipid biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:1bys, PDBe:1bys, PDBj:1bys
PDBsum1bys
PubMed10074947
UniProtQ79SE0

[Back to BioLiP]