Structure of PDB 1arz Chain A Binding Site BS01
Receptor Information
>1arz Chain A (length=270) Species:
83333
(Escherichia coli K-12) [
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ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELA
GAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGT
TGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDI
EIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVP
GTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALW
LSGKESGLFDMRDVLDLNNL
Ligand information
Ligand ID
PO4
InChI
InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKey
NBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
Software
SMILES
CACTVS 3.341
[O-][P]([O-])([O-])=O
ACDLabs 10.04
[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0
[O-]P(=O)([O-])[O-]
Formula
O4 P
Name
PHOSPHATE ION
ChEMBL
DrugBank
DB14523
ZINC
PDB chain
1arz Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
1arz
Three-dimensional structure of Escherichia coli dihydrodipicolinate reductase in complex with NADH and the inhibitor 2,6-pyridinedicarboxylate.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
H160 K163
Binding residue
(residue number reindexed from 1)
H157 K160
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H159 K163
Catalytic site (residue number reindexed from 1)
H156 K160
Enzyme Commision number
1.17.1.8
: 4-hydroxy-tetrahydrodipicolinate reductase.
Gene Ontology
Molecular Function
GO:0008839
4-hydroxy-tetrahydrodipicolinate reductase
GO:0016491
oxidoreductase activity
GO:0016726
oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
GO:0042802
identical protein binding
GO:0050661
NADP binding
GO:0051287
NAD binding
Biological Process
GO:0008652
amino acid biosynthetic process
GO:0009085
lysine biosynthetic process
GO:0009089
lysine biosynthetic process via diaminopimelate
GO:0019877
diaminopimelate biosynthetic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1arz
,
PDBe:1arz
,
PDBj:1arz
PDBsum
1arz
PubMed
9398235
UniProt
P04036
|DAPB_ECOLI 4-hydroxy-tetrahydrodipicolinate reductase (Gene Name=dapB)
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