Structure of PDB 1a6e Chain A Binding Site BS01
Receptor Information
>1a6e Chain A (length=503) Species:
2303
(Thermoplasma acidophilum) [
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REQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGAT
ILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQ
GVHPTVISNGYRLAVNEARKIIDEIAEKSTDDATLRKIALTALSGKNTGL
SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGI
VIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFL
NQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKS
DMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP
KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELA
MRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAD
DEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRID
DVI
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
1a6e Chain A Residue 898 [
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Receptor-Ligand Complex Structure
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PDB
1a6e
Crystal structure of the thermosome, the archaeal chaperonin and homolog of CCT.
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
L42 G43 P44 D94 G95 T97 T98 T157 S160 G408 L448 V491 D493
Binding residue
(residue number reindexed from 1)
L26 G27 P28 D78 G79 T81 T82 T141 S144 G392 L432 V475 D477
Annotation score
5
Enzymatic activity
Catalytic site (original residue number in PDB)
D63 T96 T97 D390
Catalytic site (residue number reindexed from 1)
D47 T80 T81 D374
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
GO:0051082
unfolded protein binding
GO:0140662
ATP-dependent protein folding chaperone
Biological Process
GO:0006457
protein folding
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:1a6e
,
PDBe:1a6e
,
PDBj:1a6e
PDBsum
1a6e
PubMed
9546398
UniProt
P48424
|THSA_THEAC Thermosome subunit alpha (Gene Name=thsA)
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