Structure of PDB 194l Chain A Binding Site BS01
Receptor Information
>194l Chain A (length=129) Species:
9031
(Gallus gallus) [
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KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGS
TDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS
DGNGMNAWVAWRNRCKGTDVQAWIRGCRL
Ligand information
Ligand ID
NA
InChI
InChI=1S/Na/q+1
InChIKey
FKNQFGJONOIPTF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Na+]
Formula
Na
Name
SODIUM ION
ChEMBL
DrugBank
DB14516
ZINC
PDB chain
194l Chain A Residue 131 [
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Receptor-Ligand Complex Structure
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PDB
194l
High-resolution structure (1.33 A) of a HEW lysozyme tetragonal crystal grown in the APCF apparatus. Data and structural comparison with a crystal grown under microgravity from SpaceHab-01 mission.
Resolution
1.4 Å
Binding residue
(original residue number in PDB)
S60 C64 N65 S72 R73
Binding residue
(residue number reindexed from 1)
S60 C64 N65 S72 R73
Annotation score
3
Enzymatic activity
Catalytic site (original residue number in PDB)
E35 N46 D48 S50 D52 N59
Catalytic site (residue number reindexed from 1)
E35 N46 D48 S50 D52 N59
Enzyme Commision number
3.2.1.17
: lysozyme.
Gene Ontology
Molecular Function
GO:0003796
lysozyme activity
GO:0005515
protein binding
GO:0016231
beta-N-acetylglucosaminidase activity
GO:0016798
hydrolase activity, acting on glycosyl bonds
GO:0042802
identical protein binding
Biological Process
GO:0016998
cell wall macromolecule catabolic process
GO:0031640
killing of cells of another organism
GO:0042742
defense response to bacterium
GO:0050829
defense response to Gram-negative bacterium
GO:0050830
defense response to Gram-positive bacterium
Cellular Component
GO:0005576
extracellular region
GO:0005615
extracellular space
GO:0005737
cytoplasm
GO:0005783
endoplasmic reticulum
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:194l
,
PDBe:194l
,
PDBj:194l
PDBsum
194l
PubMed
15299672
UniProt
P00698
|LYSC_CHICK Lysozyme C (Gene Name=LYZ)
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