Structure of PDB 7r6k Chain 8 Binding Site BS01

Receptor Information
>7r6k Chain 8 (length=458) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KEKIQKKRIQGRRGNKTDQEKADAAGTREQQQLKKSAKEEVFKDMSVETF
FEKGIEIPKVSRVSSIVKSHAGSLLILLNDITNTETAALVLHSVNELMPY
LRRILKELIKSIVGVWSTTETQIASFAFLINTTKEFKKSMLETTLKTTYS
TFIKSCRKTNMRSMPLINFQKNSAAELFGIDEVLGYQVGFEYIRQLAIHL
RNTMNATTKINSAEAYKIVYNWQFCHSLDFWSRVLSFACQPNGSESPLRQ
LIYPLVQVTLGVIRLIPTPQFFPLRFYLIKSLIRLSQNSGVFIPIYPLLS
EILTSTAFTKAPKKSPNLAAFDFEHNIKCTQAYLNTKIYQEGLSEQFVDL
LGDYFALYCKNIAFPELVTPVIISLRRYIKTSTNVKLNKRLSTVVEKLNQ
NSTFIQEKRSDVEFGPTNKSEVSRFLNDVAWNKTPLGSYVAVQREVKEEK
ARLMRESM
Ligand information
>7r6k Chain 1 (length=152) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gcugaacuuaagcauaaagcggagucgaguuguuugcagcucuaagcuac
ggugaucgucgaaggggcgaaagacaagauggggaagcuccguuucaaug
uugagcuugacucuaguuguggggaguaaaguuaccacaucgugagacag
gu
<<<.....<......>.>>>......<<<<<<<..>>>>>>>.....<.<
<<...>>>.....>...<....>........<<<....>>>.......<<
<.<<<<<<..<<<<.<...>..>>>>..>>>>>.>.>>><<....>>...
..
Receptor-Ligand Complex Structure
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PDB7r6k Sequence-specific remodeling of a topologically complex RNP substrate by Spb4.
Resolution3.17 Å
Binding residue
(original residue number in PDB)		K25 Q29 R37 G38 N39
Binding residue
(residue number reindexed from 1)		K1 Q5 R13 G14 N15
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0005515 protein binding
Biological Process
GO:0042254 ribosome biogenesis
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0005739 mitochondrion
GO:0030687 preribosome, large subunit precursor
GO:0030690 Noc1p-Noc2p complex
GO:0030691 Noc2p-Noc3p complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7r6k, PDBe:7r6k, PDBj:7r6k
PDBsum7r6k
PubMed36482249
UniProtP39744|NOC2_YEAST Nucleolar complex protein 2 (Gene Name=NOC2)

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