Structure of PDB 7naf Chain 8 Binding Site BS01

Receptor Information

>7naf Chain 8 (length=39) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

KVSKSTKKFQSKHLKHTLDQRRKEKIQKKRIQGRRGNKT

Ligand information

>7naf Chain 1 (length=378) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

auagggugaagccagaggaaacucugguggaggcucgaaaauggaauuag
acugaaggucggcgcccuggaguuaucuuuucuuguuuaucccgcuucgg
ccccaaggugaacagccucuaauguagauaagggaagucgggggaaucug
acuguuaacgagauucccacugucccuaucuacucggggaacuggcuugu
cggcucuuccuaucauaccauucgguaagcguuggauuguucacccacua
auagggaacgugagcugaauugaacuuaggaacaguucauucggauaauu
gguuuuugcggcugucugaucaggcauugccgcgaagcuaccauccgaau
cuauauauuguaagcugagauuaagccu

...<<<....<<<<<<<....>>>>>>>.....>>>..............
.......<<<<........<<<..(((..>>>...............>>>
>....<<<<.....>>>>.....<<<<<<<.<<........<<<<<<<<<
........>>.>>>>>>>.....>>.>>>>>>>.................
.......<<<<..<.<<<......>>>...>.<<<.........>>>...
..>>>>............<.<<<<<<.......>>>>>>.><<<<<...<
<<<....<<<<<<<<<<))).>>>>>..>>>>>...>>>>..>>>>>...
......<<<.........>>>.......

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7naf Sequence-specific remodeling of a topologically complex RNP substrate by Spb4.
Resolution	3.13 Å
Binding residue (original residue number in PDB)	K3 S5 K6 S7 T8 K9 K10 F11 Q12 S13 R23
Binding residue (residue number reindexed from 1)	K1 S3 K4 S5 T6 K7 K8 F9 Q10 S11 R21

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:7naf, PDBe:7naf, PDBj:7naf
PDBsum	7naf
PubMed	36482249
UniProt	P39744\|NOC2_YEAST Nucleolar complex protein 2 (Gene Name=NOC2)

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