Structure of PDB 5ibb Chain 71 Binding Site BS01

Receptor Information
>5ibb Chain 71 (length=133) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPR
RSDQNVRGTVSLPHGLGFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRA
LEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS
Ligand information
>5ibb Chain 3K (length=70) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gggugauuagcucagcgagcaccucccuuacaaggagggggcggcgguuc
gaucccgucaucacccacca
<<<<.<....<<<...>>>..<<<<<.......>>>>>......<<<...
....>>>...>.>>>>....
Receptor-Ligand Complex Structure
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PDB5ibb The ribosome prohibits the GU wobble geometry at the first position of the codon-anticodon helix.
Resolution2.96 Å
Binding residue
(original residue number in PDB)		R52 R53 K167
Binding residue
(residue number reindexed from 1)		R50 R51 K72
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
GO:0006417 regulation of translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ibb, PDBe:5ibb, PDBj:5ibb
PDBsum5ibb
PubMed27174928
UniProtP27150|RL1_THETH Large ribosomal subunit protein uL1 (Gene Name=rplA)

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