Structure of PDB 2ybb Chain 7 Binding Site BS01

Receptor Information
>2ybb Chain 7 (length=127) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ASSERELYEAWVELLSWMREYAQAKGVRFEKEADFPDFIYRMERPYDLPT
TIMTASLSDGLGEPFLLADVSPRHAKLKRIGLRLPRAHIHLHAHYEPGKG
LVTGKIPLTKERFFALADRAREALAFA
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2ybb Chain 7 Residue 204 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2ybb Arrangement of Electron Transport Chain Components in Bovine Mitochondrial Supercomplex I(1)III(2)Iv(1).
Resolution19.0 Å
Binding residue
(original residue number in PDB)		E32 G64
Binding residue
(residue number reindexed from 1)		E30 G62
Annotation score1
Enzymatic activity
Enzyme Commision number 7.1.1.-
Gene Ontology
Molecular Function
GO:0008199 ferric iron binding
GO:0048038 quinone binding
Biological Process
GO:0016226 iron-sulfur cluster assembly
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2ybb, PDBe:2ybb, PDBj:2ybb
PDBsum2ybb
PubMed21909073
UniProtQ5SKZ7|NQO15_THET8 NADH-quinone oxidoreductase subunit 15 (Gene Name=nqo15)

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