Structure of PDB 8kg8 Chain 6 Binding Site BS01

Receptor Information
>8kg8 Chain 6 (length=619) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VKKVDDVTGEKVREAFEQFLEDFSVGEVEKVYRAQIEFMKIYDLNTIYID
YQHLSMRENGALAMAISEQYYRFLPFLQKGLRRVVRKYAPELLEQTERVF
QISFFNLPTVHRIRDIRSEKIGSLLSISGTVTRTSEVRPELYKASFTCDM
CRAIVDNVEQSFKYTEPTFCPNPSCENRAFWTLNVTRSRFLDWQKVRIQE
NANEIPTGSMPRTLDVILRGDSVERAKPGDRCKFTGVEIVVPDVTQLGLP
GVKPSSNSGVTGLRSLGVRDLTYKISFLACHVISIGRDQEVFLNSLSSDE
INELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKSTVEG
IKLRGDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAV
VRDEDYTIEAGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQTISIAK
AGIHATLNARTSILAAANPVGGRYNRKLSLRGNLNMTAPIMSRFDLFFVI
LDDCNEKIDTELASHIVDLHMKIEPPFSAEQLRRYIKYARTFKPILTKEA
RSYLVEKYKELRKDDAQGFSRSSYRITVRQLESMIRLSEAIARANCVDEI
TPSFIAEAYDLLRQSIIRV
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8kg8 Synergism between CMG helicase and leading strand DNA polymerase at replication fork.
Resolution4.23 Å
Binding residue
(original residue number in PDB)		K416 V612 R614 Y621 K665
Binding residue
(residue number reindexed from 1)		K253 V400 R402 Y406 K450
Enzymatic activity
Enzyme Commision number 3.6.4.12: DNA helicase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003678 DNA helicase activity
GO:0003688 DNA replication origin binding
GO:0003697 single-stranded DNA binding
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008270 zinc ion binding
GO:0009378 four-way junction helicase activity
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0017116 single-stranded DNA helicase activity
GO:0043138 3'-5' DNA helicase activity
GO:1990518 single-stranded 3'-5' DNA helicase activity
Biological Process
GO:0000727 double-strand break repair via break-induced replication
GO:0006260 DNA replication
GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006268 DNA unwinding involved in DNA replication
GO:0006270 DNA replication initiation
GO:0006271 DNA strand elongation involved in DNA replication
GO:0006279 premeiotic DNA replication
GO:0032508 DNA duplex unwinding
GO:1902969 mitotic DNA replication
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005656 nuclear pre-replicative complex
GO:0005737 cytoplasm
GO:0031261 DNA replication preinitiation complex
GO:0031298 replication fork protection complex
GO:0042555 MCM complex
GO:0043596 nuclear replication fork
GO:0071162 CMG complex
GO:0097373 MCM core complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8kg8, PDBe:8kg8, PDBj:8kg8
PDBsum8kg8
PubMed37730685
UniProtP53091|MCM6_YEAST DNA replication licensing factor MCM6 (Gene Name=MCM6)

[Back to BioLiP]