Structure of PDB 8cen Chain 6 Binding Site BS01

Receptor Information
>8cen Chain 6 (length=383) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GGYAWEDEIKRSWDLVKVMASLVASIVEARKKRTAKKNITPYQRGIIRSL
ILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRN
GLAQLVSQVSGNPQDHIDALKSIRKQEPKGNPSLQNALEMARGLLLPVPA
HCTREVLIVFGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLSAQVAICKEL
CKATNYGDESFYKILLDETHLKELFNEAVTPLPVNKINKGFTLVKMGFPT
RIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLPTVCPCCDLMLILSTHL
ARSYHHLMPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHKNGKLLTSSR
YRCEDCKQEFCVDCDVFIHEILHNCPGCESKPV
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8cen Chain 6 Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8cen Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		C349 C352 C363 C366
Binding residue
(residue number reindexed from 1)		C273 C276 C287 C290
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 30 16:55:34 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8cen', asym_id = '6', bs = 'BS01', title = 'Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8cen', asym_id='6', bs='BS01', title='Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0000439,0006281,0006289,0006351,0008270', uniprot = '', pdbid = '8cen', asym_id = '6'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0000439,0006281,0006289,0006351,0008270', uniprot='', pdbid='8cen', asym_id='6')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>