Structure of PDB 3j9x Chain 6 Binding Site BS01

Receptor Information
>3j9x Chain 6 (length=128) Species: 157899 (Sulfolobus islandicus rod-shaped virus 2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SRSYSQRYAKWQAKFNAFSNPTVASTILSNVSPVAQQNFQTNVPKFTSVN
ENVSAVLTQYGITGPNRAIYQGFGLKVARALNRIGSGPALVNMINGLKGY
YISAFNANPQVLDAVVNIITGSPTGYVS
Ligand information
>3j9x Chain 7 (length=348) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatat
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3j9x A virus that infects a hyperthermophile encapsidates A-form DNA.
Resolution3.8 Å
Binding residue
(original residue number in PDB)		S60 G70 R73 A74 Q77
Binding residue
(residue number reindexed from 1)		S54 G64 R67 A68 Q71
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:3j9x, PDBe:3j9x, PDBj:3j9x
PDBsum3j9x
PubMed25999507
UniProtQ8V9P2|CAPSD_SIRV2 Major capsid protein

[Back to BioLiP]