Structure of PDB 2j37 Chain 6 Binding Site BS01

Receptor Information

>2j37 Chain 6 (length=81) Species: 4569 (Triticum sp.)

TREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKH
IWSSGIRSVPRRVRVRIARKRNDEEDAKEEL

Ligand information

>2j37 Chain Z (length=280)

cugcaaaguacccucagaagggaggcgaaauagagcacagcgauagucgg
gugagaaccccgacggccuaauggauaaggguuccucagcacugcugauc
agcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaa
augggaaacggguuaauauucccgugccacggggucgaucacgcugggca
ucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcg
gacgaacggcggcauagggaaacgugauuc

...........<<<.....>>>.......................<<<<<
<.......>>>>>>...................<<<<<<...<<.....>
>.>>>>>>....<<...<<<...<<<<<<.<<.....>>..>>>>>>...
..>>>..<<<<<........>>>>>>>.........<<<<<<<<<<<<<.
..>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>
>>.....>>>>>....>......>>>>>>.

Receptor-Ligand Complex Structure

Structure summary

• PDB: 2j37 Following the signal sequence from ribosomal tunnel exit to signal recognition particle.
• Resolution: 8.7 Å
• Binding residue (original residue number in PDB): K34 I41 V57 R58 I59 D60 V61 N64 K65 W68 I72 R73
• Binding residue (residue number reindexed from 1): K18 I25 V41 R42 I43 D44 V45 N48 K49 W52 I56 R57

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:2j37, PDBe:2j37, PDBj:2j37
• PDBsum: 2j37
• PubMed: 17086193
• UniProt: Q5XLD9