Structure of PDB 8ugr Chain 5n Binding Site BS01
Receptor Information
>8ugr Chain 5n (length=172) Species:
9823
(Sus scrofa) [
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AYLTHQQKVLRLYKRALRHLESWCVHRDKYRYFACLMRARFDEHKNEKDM
VKATQLLRQAEEEFWYGQHPQPYIFPESPGGTSYERYECYKVPEWCLDDW
HPSEKAMYPDYFAKREQWKRLRRESWEREVKQLQEETPPGGPRTEALPPA
RKEGDLPPLWWHIVTRPRERPM
Ligand information
Ligand ID
EHZ
InChI
InChI=1S/C25H49N2O9PS/c1-4-5-6-7-8-9-10-11-12-13-20(28)18-22(30)38-17-16-26-21(29)14-15-27-24(32)23(31)25(2,3)19-36-37(33,34)35/h20,23,28,31H,4-19H2,1-3H3,(H,26,29)(H,27,32)(H2,33,34,35)/t20-,23-/m0/s1
InChIKey
JYSKQPQRUCZFIQ-REWPJTCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
CCCCCCCCCCCC(CC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O)O
CACTVS 3.385
CCCCCCCCCCC[CH](O)CC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O
CACTVS 3.385
CCCCCCCCCCC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(O)=O
OpenEye OEToolkits 2.0.6
CCCCCCCCCCC[C@@H](CC(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)O)O)O
Formula
C25 H49 N2 O9 P S
Name
~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate
ChEMBL
DrugBank
ZINC
PDB chain
8ugr Chain 5n Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
8ugr
High-resolution in situ structures of mammalian respiratory supercomplexes.
Resolution
6.5 Å
Binding residue
(original residue number in PDB)
H11 Q12 V15 L26 R46 F47 H50 K51 E53 A59 L62 A66 F70 G73
Binding residue
(residue number reindexed from 1)
H5 Q6 V9 L20 R40 F41 H44 K45 E47 A53 L56 A60 F64 G67
Annotation score
1
External links
PDB
RCSB:8ugr
,
PDBe:8ugr
,
PDBj:8ugr
PDBsum
8ugr
PubMed
38811722
UniProt
K7GSE5
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