Structure of PDB 8ugl Chain 4F Binding Site BS01

Receptor Information
>8ugl Chain 4F (length=97) Species: 9823 (Sus scrofa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ASGGGVPTDEEQATGLEREVMMAARKGLDPYNILAPKAASGTKEDPNLVP
SITNKRIVGCICEEDNSTVIWFWVHKGETQRCPSCGTHYKLVSHQLA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8ugl Chain 4F Residue 101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8ugl High-resolution in situ structures of mammalian respiratory supercomplexes.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		C60 C62 C82 C85
Binding residue
(residue number reindexed from 1)		C60 C62 C82 C85
Annotation score4
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006119 oxidative phosphorylation
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ugl, PDBe:8ugl, PDBj:8ugl
PDBsum8ugl
PubMed38811722
UniProtQ5S3G4|COX5B_PIG Cytochrome c oxidase subunit 5B, mitochondrial (Gene Name=COX5B)

[Back to BioLiP]