Structure of PDB 8iuf Chain 4D Binding Site BS01
Receptor Information
>8iuf Chain 4D (length=173) Species:
3039
(Euglena gracilis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
STVLSILGKRFQRSALTPKMNPFIRIRCQGPIEEFQRGFIGEFHAFALPG
ACMLVASCLGTFHIIRCLVVNPELSLAKVIPEILQPFTNPNAQLKAADGK
DDDDSQVPKQWGMWGRHPNYGVLHVPFLDALNKEALARGKDGVNMGAEYN
LVFTKSMADQVVDLILDDVQKRV
Ligand information
Ligand ID
S12
InChI
InChI=1S/C24H46NO9P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-23(27)32-18-21(26)19-33-35(30,31)34-20-22(25)24(28)29/h9-10,21-22,26H,2-8,11-20,25H2,1H3,(H,28,29)(H,30,31)/t21-,22-/m0/s1
InChIKey
JZWNYZVVZXZRRH-VXKWHMMOSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
CCCCCCCCC=CCCCCCCCC(=O)OC[C@@H](CO[P@@](=O)(O)OC[C@@H](C(=O)O)N)O
OpenEye OEToolkits 1.7.6
CCCCCCCCC=CCCCCCCCC(=O)OCC(COP(=O)(O)OCC(C(=O)O)N)O
CACTVS 3.370
CCCCCCCCC=CCCCCCCCC(=O)OC[CH](O)CO[P](O)(=O)OC[CH](N)C(O)=O
CACTVS 3.370
CCCCCCCC/C=C/CCCCCCCC(=O)OC[C@H](O)CO[P](O)(=O)OC[C@H](N)C(O)=O
ACDLabs 12.01
O=C(O)C(N)COP(=O)(OCC(O)COC(=O)CCCCCCC/C=C/CCCCCCCC)O
Formula
C24 H46 N O9 P
Name
O-[(S)-hydroxy{[(2S)-2-hydroxy-3-(octadec-9-enoyloxy)propyl]oxy}phosphoryl]-L-serine;
1-oleoyl-2-hydroxy-sn-glycero-3-phospho-L-serine
ChEMBL
DrugBank
ZINC
PDB chain
8iuf Chain 4D Residue 203 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8iuf
Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Resolution
2.81 Å
Binding residue
(original residue number in PDB)
C53 V56 L60 F63 R67
Binding residue
(residue number reindexed from 1)
C52 V55 L59 F62 R66
Annotation score
1
External links
PDB
RCSB:8iuf
,
PDBe:8iuf
,
PDBj:8iuf
PDBsum
8iuf
PubMed
38388527
[
Back to BioLiP
]