Structure of PDB 7zdj Chain 4 Binding Site BS01
Receptor Information
>7zdj Chain 4 (length=421) Species:
9940
(Ovis aries) [
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ARQWQPDVEWAEQYGGAVMYPTKETAHWKPPPWNDVDPPKSNLTLNFGPQ
GVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYV
SMMCNEQAYSLAVEKLLNIQPPPRAQWIRVLFGEITRLLNHIMAVTTHAL
DIGAMTPFFWMFEEREKMFEFYERVSGARMHAAYVRPGGVHQDLPLGLMD
DIYEFSKNFSLRIDELEEMLTNNRIWRNRTVDIGVVTAEDALNYGFSGVM
LRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEEMRQSIR
IISQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVP
PGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGH
MLADVVAIIGTQDIVFGEVDR
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
7zdj Chain 6 Residue 300 [
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Receptor-Ligand Complex Structure
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PDB
7zdj
A universal coupling mechanism of respiratory complex I.
Resolution
3.25 Å
Binding residue
(original residue number in PDB)
X85 R105 H190
Binding residue
(residue number reindexed from 1)
X76 R96 H181
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016651
oxidoreductase activity, acting on NAD(P)H
GO:0048038
quinone binding
GO:0051287
NAD binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0006120
mitochondrial electron transport, NADH to ubiquinone
Cellular Component
GO:0005739
mitochondrion
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7zdj
,
PDBe:7zdj
,
PDBj:7zdj
PDBsum
7zdj
PubMed
36104567
UniProt
A0A6P3DZ89
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