Structure of PDB 6swe Chain 3 Binding Site BS01

Receptor Information
>6swe Chain 3 (length=123) Species: 272844 (Pyrococcus abyssi GE5) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MAKPSYVKFEVPKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKL
VIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVA
IIEPGKARDLVEEIAMKVRELMK
Ligand information
>6swe Chain 2 (length=468) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
guaaggcgggggagcacuacaagggguggagcgugcgguuuaauuggauu
caacgccgggaaccucaccgggggcgacggcaggaugaaggccaggcuga
aggucuugccggacgcgccgagaggaggugcauggccgccgucagcucgg
cguccacuuaagugugguaacgagcgagacccgcgcccccaguugccagu
cccucccgcucgggagggaggcacucuggggggacugccggcgauaagcc
ggaggaaggggcgggcgacgguaggucaguaugccccgaaacccccgggc
uacacgcgcgcuacaaugggcgggacaaugggugccgaccccgaaagggg
gagguaauccccuaaacccgcccucaguucggaucgcgggcugcaacucg
cccgcgugaagcuggaaucccuaguacccgcgcgucaucaucgcgcggcg
aauacgucccugcuccuu
.........<<<<<<<..<<.<<<<<<..<<<<<<<<<<......<<...
.....>>..........<<<<<<<...<<<<........<<<.<<<....
...>>>.>>>......>>>>...<<.<<<..<<<<<<<<.....<<<<..
...<<<<......>>>>....>>>>....<<<<<.<<<<<<<..<<...<
<<<<<<<....>>>>>>>>.>>...>>>>>>>.....<<<<<.....>>>
>>........>>>>>.....>>.>>>...>>>>>>>>....>>>>>>>..
.>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>
..>>....>>>.....>>>>>>>......<....<<<<<<<........>
>>>>>>....>.....>>>>>>.....<<<<<<<.......>>>>>>>..
.....>>...>>>>>>>.
Receptor-Ligand Complex Structure
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PDB6swe Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		G35 T36 N37 E38 I92 V94 A95 A96 A97
Binding residue
(residue number reindexed from 1)		G35 T36 N37 E38 I92 V94 A95 A96 A97
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0004526 ribonuclease P activity
GO:0019843 rRNA binding
Biological Process
GO:0001682 tRNA 5'-leader removal
GO:0006412 translation
GO:0008033 tRNA processing
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6swe, PDBe:6swe, PDBj:6swe
PDBsum6swe
PubMed32029867
UniProtP62008|RL7A_PYRAB Large ribosomal subunit protein eL8 (Gene Name=rpl7ae)

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