Structure of PDB 4zer Chain 2l Binding Site BS01 |
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>4zer Chain 2a (length=1504)
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uuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaaga caugcaagucgugcgggccgcgggguacuccguggucagcggcggacggg ugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaa cucgggcuaaucccccauguggacccgccccuugggguguguccaaaggg cuuugcccgcuuccggaugggcccgcgucccaucagcuaguugguggggu aauggcccaccaaggcgacgacggguagccggucugagaggauggccggc cacaggggcacugagacacgggccccacuccuacgggaggcagcaguuag gaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggagga agaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacg aggggacugacgguaccgggguaauagcgccggccaacuccgugccagca gccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaa agggcguguaggcggccuggggcgucccaugugaaagaccacggcucaac cgugggggagcgugggauacgcucaggcuagacggugggagaggguggug gaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgau ggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcgug gggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcg cgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgc cgccuggggaguacggccgcaaggcugaaacucaaaggaauugacggggg cccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaac cuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugcc ccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgug ccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuag uugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcggg aggaaggaggggacgacgucuggucagcauggcccuuacggccugggcga cacacgugcuacaaugcccacuacaaagcgaugccacccggcaacgggga gcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgac cccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcgguga auacguucccgggccuuguacacaccgcccgucacgccaugggagcgggc ucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggccc gugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcug gauc |
.....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<< <.<<<..<<<..<<.<<<<<<<<<....>>>>>>>>>.>>>>>......< <.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<..... .>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<< <...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.. .....>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>> .>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>. .......<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<.. ....<<<<....>>>>.....>>>>....<<<<<........<<<<.... .>>>>..........>>>>>......<<<<<(((...<<<<<.....<<. )))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.. ...<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....> >>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<. ...<<<<<<<.<..<<<......>>>.....>.>>>>>>>.......... .<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<< <...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<< <<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>> .>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<< <<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>...... ....<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>..... ............>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<< <<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<< ..<<<..<<<.....>>>>>>...>>>>>>>.....<<<<<....>>>>> ........>>>>.........>>>...>>>>>>>>>...>>>>>>>...> >.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>.. >>....>>>.....>>>>>>>......<....<<<<<<<........>>> >>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>.. ....>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<< <<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>> >>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>. .... |
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PDB | 4zer The proline-rich antimicrobial peptide Onc112 inhibits translation by blocking and destabilizing the initiation complex. |
Resolution | 3.1 Å |
Binding residue (original residue number in PDB) | P5 T6 N8 Q9 L10 R12 K13 R15 E16 V24 P31 F32 R33 R34 K47 N49 S50 L52 T61 Y69 G72 E73 R86 G87 K91 X92 R97 R113 K114 K115 S116 R117 S118 K119 Y120 K123 K124 |
Binding residue (residue number reindexed from 1) | P1 T2 N4 Q5 L6 R8 K9 R11 E12 V20 P27 F28 R29 R30 K43 N45 S46 L48 T57 Y65 G68 E69 R82 G83 K87 X88 R93 R109 K110 K111 S112 R113 S114 K115 Y116 K119 K120 |
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Enzyme Commision number |
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